BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016E09LP1|AL427027
(969 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1228 1669 0.0
3x_Contig1008 242 9e-64
>3x_Contig1228
Length = 5992
Score = 1669 bits (841), Expect = 0.0
Identities = 856/859 (99%), Gaps = 2/859 (0%)
Strand = Plus / Plus
Query: 1 atcctatcggtacatgatgtccgggtaacaacaagtgcatagcgtgaaaaactggttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5136 atcctatcggtacatgatgtccgggtaacaacaagtgcatagcgtgaaaaactggttttt 5195
Query: 61 ttccccttaggaaagctaataatatgacgaggacccccgcccccgcccctgtccacagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5196 ttccccttaggaaagctaataatatgacgaggacccccgcccccgcccctgtccacagaa 5255
Query: 121 atagctgcaatgactcgaggaatgctaggcaaatattaaaggaaaatcttacagtcaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5256 atagctgcaatgactcgaggaatgctaggcaaatattaaaggaaaatcttacagtcaggt 5315
Query: 181 gcattcgctgtatttacggtatatacaactcatcggaagaaagataaagagaaaatgtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5316 gcattcgctgtatttacggtatatacaactcatcggaagaaagataaagagaaaatgtac 5375
Query: 241 agcatgctgttattctcaaaactatcatcagggttaggtttggaagagtaggtcaatggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5376 agcatgctgttattctcaaaactatcatcagggttaggtttggaagagtaggtcaatggt 5435
Query: 301 gagtggcattgacaatgtcaatgccatggtcctttaacgtcttaatggtgcaacttacgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5436 gagtggcattgacaatgtcaatgccatggtcctttaacgtcttaatggtgcaacttacgg 5495
Query: 361 cagcagagcattagttaaaatatcttgtatcttactttccgggaatgtagatgagatgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5496 cagcagagcattagttaaaatatcttgtatcttactttccgggaatgtagatgagatgca 5555
Query: 421 atgtatatccgcatactcgcggtattcaagtaggtattgggaaagtatttatttttaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5556 atgtatatccgcatactcgcggtattcaagtaggtattgggaaagtatttatttttaaca 5615
Query: 481 ggatgaatggcttgctacaattgggggcggtgctgaattagtaaatgtgcatcgcatcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5616 ggatgaatggcttgctacaattgggggcggtgctgaattagtaaatgtgcatcgcatcat 5675
Query: 541 cagtcataggggaattctttcttacagatgcgtaggaaatcctgattcatcaattcgcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5676 cagtcataggggaattctttcttacagatgcgtaggaaatcctgattcatcaattcgcag 5735
Query: 601 gccgtatggaactgtttctattctcatttcttttatacctttttctttgttctgcgaatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5736 gccgtatggaactgtttctattctcatttcttttatacctttttctttgttctgcgaatt 5795
Query: 661 ttgatttgggattcaaatatatatatatatragcatcgaatatacatgatatcatgaaag 720
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5796 ttgatttgggattcaaatatatatatatataagcatcgaatatacatgatatcatgaaag 5855
Query: 721 ctgtgtcaccgaagttttattagtaaagatgttggtaaaatttgatctctcgcaactatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5856 ctgtgtcaccgaagttttattagtaaagatgttggtaaaatttgatctctcgcaactatc 5915
Query: 781 tgtcaatagataagtccaactatcgagtgagactcttatttggcttcaaatatcattctg 840
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5916 tgtcaatagataagtccaactatcgagtgagactcttatttggcttc-aatatcattctg 5974
Query: 841 tttatatatttacagttag 859
||| |||||||||||||||
Sbjct: 5975 ttt-tatatttacagttag 5992
>3x_Contig1008
Length = 3861
Score = 242 bits (122), Expect = 9e-64
Identities = 122/122 (100%)
Strand = Plus / Minus
Query: 847 tatttacagttagactttagccgggcacattatcgaaaggaattagatattagctaattg 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3861 tatttacagttagactttagccgggcacattatcgaaaggaattagatattagctaattg 3802
Query: 907 ataatcactttttttactttcaatgtcaagtactatagccagcataggtactgctgttgt 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3801 ataatcactttttttactttcaatgtcaagtactatagccagcataggtactgctgttgt 3742
Query: 967 tt 968
||
Sbjct: 3741 tt 3740
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,117
Number of Sequences: 1807
Number of extensions: 11117
Number of successful extensions: 183
Number of sequences better than 1.0e-20: 2
length of query: 969
length of database: 10,358,551
effective HSP length: 16
effective length of query: 953
effective length of database: 10,329,639
effective search space: 9844145967
effective search space used: 9844145967
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)